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Daubenberger C. Assessment of experimental malaria vaccine induced protection in pre-exposed populations. Lancet Infect Dis. 2022;22(3):305-307. DOI: 10.1016/S1473-3099(21)00359-5

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Hosch S, Mpina M, Nyakurungu E, Silochi Borico N, Obama T.M.A, Ovona M.C, Wagner P, Rubin S.E, Vickos U, Milang D.V.N, Ondo'o Ayekaba M, Phiri W.P, Daubenberger C.A, Schindler T. Genomic surveillance enables the identification of co-infections with multiple SARS-CoV-2 lineages in equatorial Guinea. Front Public Health. 2022;9:818401. DOI: 10.3389/fpubh.2021.818401

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Hosch S, Yoboue C.A, Donfack O.T, Guirou E.A, Dangy J.P, Mpina M, Nyakurungu E, Blöchliger K, Guerra C.A, Phiri W.P, Ayekaba M.O, García G.A, Tanner M, Daubenberger C, Schindler T. Analysis of nucleic acids extracted from rapid diagnostic tests reveals a significant proportion of false positive test results associated with recent malaria treatment. Malar J. 2022;21:23. DOI: 10.1186/s12936-022-04043-7

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Jongo S.A, Church L.W.P, Nchama Vunn, Hamad A, Chuquiyauri R, Kassim K.R, Athuman T, Deal A, Natasha K.C, Mtoro A, Mpina M, Nyakarungu E, Bidjimi G.O, Owono M.A, Maye E.R.M, Mangue M.E.O, Okomo G.N.N, Pasialo B.E.N, Mandumbi D.M.O, Mikue M.A.L, Mochomuemue F.L, Obono M.O, Besaha J.C.M, Bijeri J.R, Abegue G.M, Veri Y.R, Bela I.T, Chochi F.C, Lima Sánchez J.E, Pencelli V, Gayozo G, Nlang Jaem, Schindler T, James E.R, Abebe Y, Lemiale L, Stabler T.C, Murshedkar T, Chen M.C, Schwabe C, Ratsirarson J, Rivas M.R, Ayekaba M.O, Milang D.V.N, Falla C.C, Phiri W.P, Garcia G.A, Maas C.D, Nlavo B.M, Tanner M, Billingsley P.F, Kim Lee Sim B, Daubenberger C, Hoffman S.L, Abdulla S, Richie T.L. Multi-dose priming regimens of PfSPZ vaccine: safety and efficacy against controlled human malaria infection in Equatoguinean adults. Am J Trop Med Hyg. 2022(in press). DOI: 10.4269/ajtmh.21-0942

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Macià D, Campo J.J, Moncunill G, Jairoce C, Nhabomba A.J, Mpina M, Sorgho H, Dosoo D, Traore O, Kusi K.A, Williams N.A, Oberai A, Randall A, Sanz H, Valim C, Asante K.P, Owusu-Agyei S, Tinto H, Agnandji S.T, Kariuki S, Gyan B, Daubenberger C, Mordmuller B, Petrone P, Dobaño C. Strong off-target antibody reactivity to malarial antigens induced by RTS,S/AS01E vaccination is associated with protection. JCI Insight. 2022(in press). DOI: 10.1172/jci.insight.158030

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Manock S.R, Nsue V.U, Olotu A, Mpina M, Nyakarungu E, Raso J, Mtoro A, Ondo Mangue M.E, Ntutumu Pasialo B.E, Nguema R, Riyahi P, Schindler T, Daubenberger C, Church L.W.P, Billingsley P.F, Richie T.L, Abdulla S, Hoffman S.L. The impact of Loa loa microfilaraemia on research subject retention during a whole sporozoite malaria vaccine trial in Equatorial Guinea. Trans R Soc Trop Med Hyg. 2022(in press). DOI: 10.1093/trstmh/trac019

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Moncunill G, Carnes J, Chad Young W, Carpp L, De Rosa S, Campo J.J, Nhabomba A, Mpina M, Jairoce C, Finak G, Haas P, Muriel C, Van P, Sanz H, Dutta S, Mordmüller B, Agnandji S.T, Díez-Padrisa N, Williams N.A, Aponte J.J, Valim C, Neafsey D.E, Daubenberger C, McElrath M.J, Dobaño C, Stuart K, Gottardo R. Transcriptional correlates of malaria in RTS,S/AS01-vaccinated African children: a matched case-control study. eLife. 2022;11:e70393. DOI: 10.7554/eLife.70393

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Mpina M, Stabler T.C, Schindler T, Raso J, Deal A, Acuche Pupu L, Nyakarungu E, Del Carmen Ovono Davis M, Urbano V, Mtoro A, Hamad A, Lopez M.S.A, Pasialo B, Eyang M.A.O, Rivas M.R, Falla C.C, Garcia G.A, Momo J.C, Chuquiyauri R, Saverino E, Preston Church L.W, Kim Lee Sim B, Manguire B, Tanner M, Maas C, Abdulla S, Billingsley P.F, Hoffman S.L, Jongo S, Richie T.L, Daubenberger C.A. Diagnostic performance and comparison of ultrasensitive and conventional rapid diagnostic test, thick blood smear and quantitative PCR for detection of low-density Plasmodium falciparum infections during a controlled human malaria infection study. Malar J. 2022;21:99. DOI: 10.1186/s12936-022-04103-y

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Yoboue C.A, Hosch S, Donfack O.T, Guirou E.A, Nlavo B.M, Ayekaba M.O, Guerra C, Phiri W.P, Garcia G.A, Schindler T, Daubenberger C.A. Characterising co-infections with Plasmodium spp., Mansonella perstans or Loa loa in asymptomatic children, adults and elderly people living on Bioko Island using nucleic acids extracted from malaria rapid diagnostic tests. PLoS Negl Trop Dis. 2022;16(1):e0009798. DOI: 10.1371/journal.pntd.0009798

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Bechtold P, Wagner P, Hosch S, Siegrist D, Ruiz-Serrano A, Gregorini M, Mpina M, Ondó F.A, Obama J, Ayekaba M.O, Engler O, Stark W.J, Daubenberger C.A, Schindler T. Rapid identification of SARS-CoV-2 variants of concern using a portable peakPCR platform. Anal Chem. 2021;93(49):16350-16359. DOI: 10.1021/acs.analchem.1c02368

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Brunetti G, Padovani F, De Pastina A, Rotella C, Monahan Am, Hoffman S.L, Jongo S.A, Abdulla S, Corradin G, Pluschke G, Daubenberger C, Hegner M. Nanotechnological immunoassay for rapid label-free analysis of candidate malaria vaccines. Nanoscale. 2021;13(4):2338-2349. DOI: 10.1039/D0NR08083G

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Chen Y, Xu K, Piccoli L, Foglierini M, Tan J, Jin W, Gorman J, Tsybovsky Y, Zhang B, Traore B, Silacci-Fregni C, Daubenberger C, Crompton P.D, Geiger R, Sallusto F, Kwong P.D, Lanzavecchia A. Structural basis of malaria RIFIN binding by LILRB1-containing antibodies. Nature. 2021(592):639–643. DOI: 10.1038/s41586-021-03378-6

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Cuénod A, Wüthrich D, Seth-Smith H.M.B, Ott C, Gehringer C, Foucault F, Mouchet R, Kassim A, Revathi G, Vogt D.R, von Felten S, Bassetti S, Tschudin-Sutter S, Hettich T, Schlotterbeck G, Homberger C, Casanova C, Moran-Gilad J, Sagi O, Rodriguez-Sanchez B, Muller F, Aerni M, Gaia V, van Dessel H, Kampinga G.A, Müller C, Daubenberger C, Pflüger V, Egli A. Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study. Genome Med. 2021;13:150. DOI: 10.1186/s13073-021-00960-5

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Duffy F.J, Du Y, Carnes J, Epstein J.E, Hoffman S.L, Abdulla S, Jongo S, Mpina M, Daubenberger C, Aitchison J.D, Stuart K. Early whole blood transcriptional responses to radiation-attenuated Plasmodium falciparum sporozoite vaccination in malaria naive and malaria pre-exposed adult volunteers. Malar J. 2021;20:308. DOI: 10.1186/s12936-021-03839-3

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Fink G, Orlova-Fink N, Schindler T, Grisi S, Ferrer A.P.S, Daubenberger C, Brentani A. Inactivated trivalent influenza vaccination is associated with lower mortality among patients with COVID-19 in Brazil. BMJ Evid Based Med. 2021;26(4):192-193. DOI: 10.1136/bmjebm-2020-111549

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Jongo S.A, Urbano V, Church L.W.P, Olotu A, Manock S.R, Schindler T, Mtoro A, Kc N, Hamad A, Nyakarungu E, Mpina M, Deal A, Bijeri J.R, Ondo Mangue M.E, Ntutumu Pasialo B.E, Nguema G.N, Owono S.N, Rivas M.R, Chemba M, Kassim K.R, James E.R, Stabler T, Abebe Y, Saverino E, Sax J, Hosch S, Tumbo A.M, Gondwe L, Segura J.L, Falla C.C, Phiri W.P, Hergott D.E.B, Garcia G.A, Schwabe C, Maas C.D, Murshedkar T, Billingsley P.F, Tanner M, Ayekaba M.O, Sim B.K.L, Daubenberger C, Richie T.L, Abdulla S, Hoffman S.L. Immunogenicity and protective efficacy of radiation-attenuated and chemo-attenuated PfSPZ vaccines in Equatoguinean adults. Am J Trop Med Hyg. 2021;104(1):283-293. DOI: 10.4269/ajtmh.20-0435

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Nchama Vunn, Said A.H, Mtoro A, Bidjimi G.O, Owono M.A, Maye E.R.M, Mangue M.E.O, Okomo G.N.N, Pasialo B.E.N, Ondo D.M, Lopez M.A, Mochomuemue F.L, Obono M.O, Besaha J.C.M, Chuquiyauri R, Jongo S.A, Kamaka K, Kibondo U.A, Athuman T, Falla C.C, Eyono J.N.M, Smith J.M, Garcia G.A, Raso J, Nyakarungu E, Mpina M, Schindler T, Daubenberger C, Lemiale L, Billingsley P.F, Sim B.K.L, Richie T.L, Church L.W.P, Olotu A, Tanner M, Hoffman S.L, Abdulla S. Incidence of Plasmodium falciparum malaria infection in 6-month to 45-year-olds on selected areas of Bioko Island, Equatorial Guinea. Malar J. 2021;20:322. DOI: 10.1186/s12936-021-03850-8

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Oneko M, Steinhardt L.C, Yego R, Wiegand R.E, Swanson P.A, Kc N, Akach D, Sang T, Gutman J.R, Nzuu E.L, Dungani A, Kim Lee Sim B, Oloo P.N, Otieno K, Bii D.K, Billingsley P.F, James E.R, Kariuki S, Samuels A.M, Jongo S, Chebore W, Abdulla S, Daubenberger C, Mpina M, Styers D, Potter G.E, Abarbanell G, Richie T.L, Hoffman S.L, Seder R.A. Safety, immunogenicity and efficacy of PfSPZ vaccine against malaria in infants in western Kenya: a double-blind, randomized, placebo-controlled phase 2 trial. Nat Med. 2021;27(9):1636-1645. DOI: 10.1038/s41591-021-01470-y

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Tumbo A.M, Schindler T, Dangy J.P, Orlova-Fink N, Bieri J.R, Mpina M, Milando F.A, Juma O, Hamad A, Nyakarungu E, Chemba M, Mtoro A, Ramadhan K, Olotu A, Makweba D, Mgaya S, Stuart K, Perreau M, Stapleton J.T, Jongo S, Hoffman S.L, Tanner M, Abdulla S, Daubenberger C. Role of human Pegivirus infections in whole Plasmodium falciparum sporozoite vaccination and controlled human malaria infection in African volunteers. Virol J. 2021;18(1):28. DOI: 10.1186/s12985-021-01500-8

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Vanobberghen F, Lweno O, Kümmerle A, Mwebi K.D, Asilia P, Simon B, Mswata S, Schmidlin S, Glass T.R, Daubenberger C, Tanner M, Meyer-Monard S. Efficacy and safety of intravenous ferric carboxymaltose compared with oral iron for the treatment of iron deficiency anaemia in women after childbirth in Tanzania: a parallelgroup, open-label, randomised controlled phase 3 trial. Lancet Glob Health. 2021;9(2):e189-e198. DOI: 10.1016/S2214-109X(20)30448-4

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Billingsley P.F, Maas C.D, Olotu A, Schwabe C, Garcia G.A, Rivas M.R, Hergott D.E.B, Daubenberger C, Saverino E, Chaouch A, Embon O, Chemba M, Nyakrungu E, Hamad A, Cortes C, Schindler T, Mpina M, Mtoro A, Sim K.L.B, Richie T.L, McGhee K, Tanner M, Obiang Lima G.M, Abdulla S, Hoffman S.L, Ayekaba M.O. The Equatoguinean Malaria Vaccine Initiative: from the launching of a clinical research platform to malaria elimination planning in Central West Africa. Am J Trop Med Hyg. 2020;103(3):947-954. DOI: 10.4269/ajtmh.19-0966

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Camponovo F, Campo J.J, Le T.Q, Oberai A, Hung C, Pablo J.V, Teng A.A, Liang X, Sim B.K.L, Jongo S, Abdulla S, Tanner M, Hoffman S.L, Daubenberger C, Penny M. Proteome-wide analysis of a malaria vaccine study reveals personalized humoral immune profiles in Tanzanian adults. Elife. 2020;9:e53080. DOI: 10.7554/eLife.53080

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Daubenberger C.A. Towards protective immune responses against malaria in pregnant women. Lancet Infect Dis. 2020;20(5):517-519. DOI: 10.1016/S1473-3099(20)30002-5

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Geiger K.M, Guignard D, Yang C, Bikorimana J.-P, Correia B.E, Houard S, Mkindi C, Daubenberger C, Spertini F, Corradin G, Audran R. Epitope mapping and fine specificity of human T and B cell responses for novel candidate blood-stage malaria vaccine P27A. Front Immunol. 2020;11:412. DOI: 10.3389/fimmu.2020.00412

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Guirou E.A, Schindler T, Hosch S, Donfack O.T, Yoboue C.A, Krähenbühl S, Deal A, Cosi G, Gondwe L, Mwangoka G, Masuki H, Salim N, Mpina M, Said J, Abdualla S, Hoffmann S.L, Nlavo B.N, Maas C, Cortes Falla C, Phiri W.O, Garcia G.A, Tanner M, Daubenberger C. Molecular malaria surveillance using a novel protocol for extraction and analysis of nucleic acids retained on used rapid diagnostic tests. Sci Rep. 2020;10:12305. DOI: 10.1038/s41598-020-69268-5

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Hill D.L, Carr E.J, Rutishauser T, Moncunill G, Campo J.J, Innocentin S, Mpina M, Nhabomba A, Tumbo A, Jairoce C, Moll H.A, van Zelm M.C, Dobaño C, Daubenberger C, Linterman M.A. Immune system development varies according to age, location, and anemia in African children. Sci Transl Med. 2020;12(529):eaaw9522. DOI: 10.1126/scitranslmed.aaw9522

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Jongo S.A, Church L.W.P, Mtoro A.T, Chakravarty S, Ruben A.J, Swanson Ii P.A, Kassim K.R, Mpina M, Tumbo A.M, Milando F.A, Qassim M, Juma O.A, Bakari B.M, Simon B, James E.R, Abebe Y, Kc N, Saverino E, Fink M, Cosi G, Gondwe L, Studer F, Styers D, Seder R.A, Schindler T, Billingsley P.F, Daubenberger C, Sim B.K.L, Tanner M, Richie T.L, Abdulla S, Hoffman S.L. Increase of dose associated with decrease in protection against controlled human malaria infection by PfSPZ vaccine in Tanzanian adults. Clin Infect Dis. 2020;71(11):2849-2857. DOI: 10.1093/cid/ciz1152

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Keller D, Rothen J, Dangy J.P, Saner C, Daubenberger C, Allan F, Ame S.M, Ali S.M, Kabole F, Hattendorf J, Rollinson D, Seyfarth R, Knopp S. Performance of a real-time PCR approach for diagnosing Schistosoma haematobium infections of different intensity in urine samples from Zanzibar. Infect Dis Poverty. 2020;9:128. DOI: 10.1186/s40249-020-00726-y

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Krähenbühl S, Studer F, Guirou E, Deal A, Mächler P, Hosch S, Mpina M, Mswata S, Daubenberger C, Schindler T. ELIMU-MDx: a web-based, open-source platform for storage, management and analysis of diagnostic qPCR data. Biotechniques. 2020;68(1):22-27. DOI: 10.2144/btn-2019-0064

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Moncunill G, Scholzen A, Mpina M, Nhabomba A, Hounkpatin A.B, Osaba L, Valls R, Campo J.J, Sanz H, Jairoce C, Williams N.A, Pasini E.A, Arteta D, Kocken C.H.M, Agnandji S.T, Mas J.M, Mordmüller B, Daubenberger C, Sauerwein R, Dobaño C. Antigen-stimulated PBMC transcriptional protective signatures for malaria immunization. Sci Transl Med. 2020;12(543):eaay8924. DOI: 10.1126/scitranslmed.aay8924

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Palmateer N.C, Tretina K, Orvis J, Ifeonu O.O, Crabtree J, Drabek E, Pelle R, Awino E, Gotia H.T, Munro J.B, Tallon L, Morrison W.I, Daubenberger C.A, Nene V, Knowles D.P, Bishop R.P, Silva J.C. Capture-based enrichment of Theileria parva DNA enables full genome assembly of first buffalo-derived strain and reveals exceptional intra-specific genetic diversity. PLoS Negl Trop Dis. 2020;14(10):e0008781. DOI: 10.1371/journal.pntd.0008781

2020
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Rothen J, Sapugahawatte D.N, Li C, Lo N, Vogel G, Foucault F, Pfluger V, Pothier J.F, Blom J, Daubenberger C, Ip M. A simple, rapid typing method for Streptococcus agalactiae based on ribosomal subunit proteins by MALDI-TOF MS. Sci Rep. 2020;10:8788. DOI: 10.1038/s41598-020-65707-5

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Rutishauser T, Lepore M, Di Blasi D, Dangy J.P, Abdulla S, Jongo S, Ramadhani K, Sim B.K.L, Hoffman S.L, Tanner M, Daubenberger C, De Libero G. Activation of TCR Vδ1+ and Vδ1-Vδ2- γδ T cells upon controlled infection with Plasmodium falciparum in Tanzanian volunteers. J Immunol. 2020;204(1):180-191. DOI: 10.4049/jimmunol.1900669

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Schmaler M, Orlova-Fink N, Rutishauser T, Adbdulla S, Daubenberger C. Human unconventional T cells in Plasmodium falciparum infection. Semin Immunopathol. 2020;42(3):265-277. DOI: 10.1007/s00281-020-00791-3

2020
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Tretina K, Haidar M, Madsen-Bouterse S.A, Sakura T, Mfarrej S, Fry L, Chaussepied M, Pain A, Knowles D.P, Nene V.M, Ginsberger D, Daubenberger C, Bishop R.P, Langsley G, Silva J.C. Theileria parasites subvert E2F signaling to stimulate leukocyte proliferation. Sci Rep. 2020;10:3982. DOI: 10.1038/s41598-020-60939-x

2020
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